- Linking Virus Genomes with Host Taxonomy. doi link

Auteur(s): Mihara Tomoko, Nishimura Yosuke, Shimizu Yugo, Nishiyama Hiroki, Yoshikawa Genki, Uehara Hideya, Hingamp P., Goto Susumu, Ogata Hiroyuki

(Article) Publié: Viruses, vol. 8 p.66 (2016)

Ref HAL: hal-01435950_v1
PMID 26938550
DOI: 10.3390/v8030066
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Environmental genomics can describe all forms of organisms--cellular and viral--present in a community. The analysis of such eco-systems biology data relies heavily on reference databases, e.g., taxonomy or gene function databases. Reference databases of symbiosis sensu lato, although essential for the analysis of organism interaction networks, are lacking. By mining existing databases and literature, we here provide a comprehensive and manually curated database of taxonomic links between viruses and their cellular hosts.